MLOC_71951 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.863034.326965.278055.57731
LEAShoots from the seedlings (10 cm shoot stage)5.118162.427874.055383.19789
INF1Young developing inflorescences (5mm)11.795211.502511.01111.1556
INF2Developing inflorescences (1-1.5 cm)4.723357.161385.128257.73609
ROORoots from the seedlings (10 cm shoot stage)2.809214.27984.559275.31996
NODDeveloping tillers at six leaf stage, 3rd internode5.773225.111158.0795816.3614
CAR5Developing grain, bracts removed (5 DPA)3.546784.249873.577554.60485
CAR15Developing grain, bracts removed (15 DPA)1.124051.078730.9109783.00009



CDS Structure of MLOC_71951






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71951.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366359NoneNoneNoneNone
MLOC_71951.1CUST_6106_PI427708080AvailableAvailablecontig_60765 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g37620.1 -1 2e-66 223 135/185 (73%) 13107.m03874 protein fiber expressed protein, putative, expressed
TAIR PP10 AT1G61260.1 -1 9e-32 126 74/149 (50%) Protein of unknown function (DUF761) | chr1:22593756-22594986 REVERSE LENGTH=344