MLOC_71950 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4650540.6285930.6359470.545619
LEAShoots from the seedlings (10 cm shoot stage)0.6017693.65970.6179391.25765
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.466591.866641.016942.18652
NODDeveloping tillers at six leaf stage, 3rd internode00.013888700.109829
CAR5Developing grain, bracts removed (5 DPA)00.0451560.1027360.0314972
CAR15Developing grain, bracts removed (15 DPA)0.4147270.3269010.2700130.880896



CDS Structure of MLOC_71950






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71950.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372714NoneNoneNoneNone
MLOC_71950.4CUST_6105_PI427708080AvailableAvailablecontig_60761 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g58194.1 -2 0.0 628 307/390 (79%) 13101.m06178 protein protein disulfide isomerase, putative, expressed
TAIR PP10 AT1G60420.1 -2 1e-78 262 148/407 (36%) DC1 domain-containing protein | chr1:22261978-22264243 FORWARD LENGTH=578