- Predicted Gene MLOC_71920
MLOC_71920 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.54137 | 3.03458 | 2.16124 | 2.66239 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.29706 | 0.494143 | 1.08833 | 1.27633 |
| INF1 | Young developing inflorescences (5mm) | 3.77417 | 1.7457 | 2.5283 | 2.40345 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.503379 | 0.603589 | 1.03256 | 0.809131 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.100243 | 0.167981 | 0.675479 | 0.25497 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.00527721 | 0.0139806 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0226585 | 0.0864784 | 0 | 0.0649125 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.63492 | 2.20636 | 26.6381 | 26.275 |
CDS Structure of MLOC_71920
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71920.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g54190.1 |
+2 |
0.0 |
558 |
376/514 (73%) |
13102.m06205 protein pectinesterase, putative, expressed |
| TAIR PP10 |
AT2G43050.1 |
+2 |
1e-111 |
350 |
220/437 (50%) |
| Symbols: ATPMEPCRD | Plant invertase/pectin methylesterase inhibitor superfamily | chr2:17902508-17904174 FORWARD LENGTH=518 |