- Predicted Gene MLOC_71899
MLOC_71899 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71899_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71899_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.0902393 | 0.237057 | 0.194903 | 0.193219 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.44714 | 0.33703 |
INF1 | Young developing inflorescences (5mm) | 0.0570908 | 0.267814 | 0.0693637 | 0.130987 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0588105 | 0 | 0 | 0.074043 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.84808 | 0.8651 | 2.90722 | 1.12685 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.475043 | 0.0308139 | 0.0566661 | 0.0718384 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.585643 | 0.138583 | 0 | 0.39261 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.16522 | 1.86954 | 1.27482 | 4.77006 |
CDS Structure of MLOC_71899
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71899.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g09980.1 |
+2 |
2e-33 |
123 |
94/187 (50%) |
13102.m01101 protein expressed protein |
TAIR PP10 |
AT3G50800.1 |
+2 |
3e-14 |
68 |
39/94 (41%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18882444-18882902 REVERSE LENGTH=152 |