MLOC_71888 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.843174.942316.638425.96964
LEAShoots from the seedlings (10 cm shoot stage)5.603861.536152.916312.99383
INF1Young developing inflorescences (5mm)3.092513.394751.912462.35112
INF2Developing inflorescences (1-1.5 cm)2.052282.118891.754162.13518
ROORoots from the seedlings (10 cm shoot stage)10.2087.617976.4144410.2759
NODDeveloping tillers at six leaf stage, 3rd internode16.795920.30822.584566.8551
CAR5Developing grain, bracts removed (5 DPA)2.423442.097912.614652.22281
CAR15Developing grain, bracts removed (15 DPA)2.898821.721061.773575.01894



CDS Structure of MLOC_71888






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71888.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71888.1CUST_9645_PI427708083AvailableAvailablecontig_60663 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g30130.2 -1 3e-13 70 30/39 (77%) 13103.m03452 protein phospholipase C, putative, expressed
TAIR PP10None-----