MLOC_71887 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4172450.5471870.4853670.438617
LEAShoots from the seedlings (10 cm shoot stage)3.146730.7911711.062941.37576
INF1Young developing inflorescences (5mm)1.627912.902791.909351.61052
INF2Developing inflorescences (1-1.5 cm)0.8028280.4798160.2272420.534935
ROORoots from the seedlings (10 cm shoot stage)1.637592.462722.229332.36298
NODDeveloping tillers at six leaf stage, 3rd internode45.732535.749137.1092104.019
CAR5Developing grain, bracts removed (5 DPA)1.191051.1071.397271.00307
CAR15Developing grain, bracts removed (15 DPA)37.938554.412631.214186.8538



CDS Structure of MLOC_71887






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71887.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251257.1NoneNoneNoneNone
MLOC_71887.2CUST_6095_PI427708080AvailableAvailablecontig_60663 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g30130.2 -3 0.0 630 292/335 (87%) 13103.m03452 protein phospholipase C, putative, expressed
TAIR PP10 AT1G13680.1 -3 1e-141 430 208/324 (64%) PLC-like phosphodiesterases superfamily protein | chr1:4690409-4692702 FORWARD LENGTH=346