MLOC_71879 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.019065300.02417
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.909053.002021.578572.52192
CAR15Developing grain, bracts removed (15 DPA)1.647820.6661531.348863.16542



CDS Structure of MLOC_71879






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71879.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71879.1CUST_15719_PI427708080AvailableAvailablecontig_60645 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g21110.1 -2 0.0 697 359/565 (64%) 13110.m01743 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT4G33840.1 -2 3e-168 497 273/550 (50%) Glycosyl hydrolase family 10 protein | chr4:16223694-16226095 REVERSE LENGTH=576