- Predicted Gene MLOC_71879
MLOC_71879 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71879_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71879_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0190653 | 0 | 0.02417 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.90905 | 3.00202 | 1.57857 | 2.52192 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.64782 | 0.666153 | 1.34886 | 3.16542 |
CDS Structure of MLOC_71879
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71879.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g21110.1 |
-2 |
0.0 |
697 |
359/565 (64%) |
13110.m01743 protein glycosyl hydrolase family 10 protein, putative, expressed |
TAIR PP10 |
AT4G33840.1 |
-2 |
3e-168 |
497 |
273/550 (50%) |
Glycosyl hydrolase family 10 protein | chr4:16223694-16226095 REVERSE LENGTH=576 |