MLOC_71845 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.334974.069034.787083.9969
LEAShoots from the seedlings (10 cm shoot stage)25.067.9742517.305512.3135
INF1Young developing inflorescences (5mm)2.73213.699162.291952.5569
INF2Developing inflorescences (1-1.5 cm)1.979061.994232.330642.30453
ROORoots from the seedlings (10 cm shoot stage)2.962661.918552.582832.02366
NODDeveloping tillers at six leaf stage, 3rd internode12.604411.505615.644527.2804
CAR5Developing grain, bracts removed (5 DPA)0.7104770.4740010.644940.593965
CAR15Developing grain, bracts removed (15 DPA)0.5794660.1223741.598471.67029



CDS Structure of MLOC_71845






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71845.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368112NoneNoneNoneNone
MLOC_71845.1CUST_18414_PI427708080AvailableAvailablecontig_60593 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32670.1 +1 0.0 680 373/466 (80%) 13109.m03260 protein UDP-glucuronate 4-epimerase, putative, expressed
TAIR PP10 AT3G23820.1 +1 1e-172 504 284/456 (62%) | Symbols: GAE6 | UDP-D-glucuronate 4-epimerase 6 | chr3:8603645-8605027 FORWARD LENGTH=460