MLOC_7183 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 72.5349 | 102.241 | 95.377 | 89.5491 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 77.0411 | 39.1665 | 41.5218 | 43.8124 |
| INF1 | Young developing inflorescences (5mm) | 78.4127 | 77.1147 | 69.6277 | 61.0673 |
| INF2 | Developing inflorescences (1-1.5 cm) | 70.7332 | 76.9829 | 67.5389 | 75.5076 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 60.179 | 90.0629 | 63.5236 | 93.729 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 90.7503 | 81.5362 | 53.3181 | 243.36 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 156.373 | 139.3 | 143.728 | 133.992 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 66.6572 | 63.3773 | 61.6119 | 140.906 |
CDS Structure of MLOC_7183
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7183.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g17430.1 |
+2 |
0.0 |
1627 |
885/950 (93%) |
13101.m01949 protein coatomer subunit beta-1, putative, expressed |
| TAIR PP10 |
AT4G31480.2 |
+2 |
0.0 |
1357 |
715/950 (75%) |
Coatomer, beta subunit | chr4:15264145-15267384 FORWARD LENGTH=948 |
