MLOC_71794 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.747735.137833.850933.3484
LEAShoots from the seedlings (10 cm shoot stage)26.559815.349516.867318.3541
INF1Young developing inflorescences (5mm)95.229793.418392.88177.8457
INF2Developing inflorescences (1-1.5 cm)74.193285.532575.841687.4032
ROORoots from the seedlings (10 cm shoot stage)9.0627618.524316.456222.9862
NODDeveloping tillers at six leaf stage, 3rd internode12.166211.398611.608343.511
CAR5Developing grain, bracts removed (5 DPA)33.885932.626636.755833.9304
CAR15Developing grain, bracts removed (15 DPA)15.063714.535713.087931.6356



CDS Structure of MLOC_71794






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71794.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362428NoneNoneNoneNone
MLOC_71794.3CUST_6086_PI427708080AvailableAvailablecontig_6051 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g35100.2 +2 0.0 807 407/628 (65%) 13102.m03807 protein DDT domain containing protein, putative, expressed
TAIR PP10 AT5G08630.1 +2 2e-134 419 249/605 (41%) DDT domain-containing protein | chr5:2798575-2802138 REVERSE LENGTH=723