MLOC_71779 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.384119.742817.127518.7747
LEAShoots from the seedlings (10 cm shoot stage)12.16286.573576.638417.27474
INF1Young developing inflorescences (5mm)56.991658.65368.07651.5837
INF2Developing inflorescences (1-1.5 cm)93.550572.927379.134588.7743
ROORoots from the seedlings (10 cm shoot stage)13.351616.997117.26119.9089
NODDeveloping tillers at six leaf stage, 3rd internode4.455596.8592811.47224.6208
CAR5Developing grain, bracts removed (5 DPA)22.731920.17623.208121.2953
CAR15Developing grain, bracts removed (15 DPA)19.515818.712317.870443.6912



CDS Structure of MLOC_71779






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71779.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358577NoneNoneNoneNone
MLOC_71779.3CUST_6084_PI427708080AvailableAvailablecontig_60464 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63590.1 -2 0.0 1244 626/683 (92%) 13103.m07052 protein metallo-beta-lactamase, putative, expressed
TAIR PP10 AT1G61010.3 -2 0.0 1080 534/677 (79%) | Symbols: CPSF73-I | cleavage and polyadenylation specificity factor 73-I | chr1:22474954-22477660 REVERSE LENGTH=693