MLOC_71767 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.01868.1261110.28349.31726
LEAShoots from the seedlings (10 cm shoot stage)10.733120.056230.18615.7474
INF1Young developing inflorescences (5mm)3.532135.294345.406313.76036
INF2Developing inflorescences (1-1.5 cm)2.173212.426642.939662.54754
ROORoots from the seedlings (10 cm shoot stage)3.056223.090152.271213.29842
NODDeveloping tillers at six leaf stage, 3rd internode11.385812.60428.5449833.9199
CAR5Developing grain, bracts removed (5 DPA)2.866693.086293.639532.91999
CAR15Developing grain, bracts removed (15 DPA)0.9519630.8385930.9868572.07215



CDS Structure of MLOC_71767






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71767.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363422NoneNoneNoneNone
MLOC_71767.1CUST_6082_PI427708080AvailableAvailablecontig_60446 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58270.1 +1 7e-168 488 233/285 (82%) 13102.m06750 protein metallo-beta-lactamase family protein, putative, expressed
TAIR PP10 AT4G33540.1 +1 2e-118 361 174/289 (60%) metallo-beta-lactamase family protein | chr4:16130882-16133678 FORWARD LENGTH=355