- Predicted Gene MLOC_71762
MLOC_71762 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 40.4258 | 46.8471 | 53.9214 | 49.3868 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 73.7477 | 62.9951 | 57.4114 | 58.6801 |
| INF1 | Young developing inflorescences (5mm) | 20.8942 | 23.8884 | 26.2876 | 20.2643 |
| INF2 | Developing inflorescences (1-1.5 cm) | 34.8169 | 28.6453 | 36.4809 | 36.5898 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 67.8033 | 61.4592 | 59.9748 | 82.5814 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 54.0993 | 54.9185 | 65.782 | 208.282 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 46.461 | 42.6115 | 40.7231 | 43.5697 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 140.948 | 130.926 | 132.984 | 318.189 |
CDS Structure of MLOC_71762
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71762.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g39150.1 |
+1 |
0.0 |
904 |
510/677 (75%) |
13108.m04172 protein expressed protein |
| TAIR PP10 |
AT5G35690.1 |
+1 |
2e-168 |
505 |
315/673 (47%) |
CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:13865027-13868117 REVERSE LENGTH=603 |