- Predicted Gene MLOC_71749
MLOC_71749 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71749_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71749_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.40355 | 0.702223 | 0.833249 | 1.63718 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.70147 | 17.3019 | 53.073 | 19.6155 |
INF1 | Young developing inflorescences (5mm) | 0.0496901 | 0.028859 | 0 | 0.0122727 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0129084 | 0 | 0 | 0.0260718 |
ROO | Roots from the seedlings (10 cm shoot stage) | 32.279 | 32.4638 | 27.5616 | 35.4924 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.217846 | 0.26895 | 0.318851 | 0.849262 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0161107 | 0 | 0 | 0.0191611 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.080308 | 0.0377156 | 0.00816861 |
CDS Structure of MLOC_71749
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71749.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g51520.1 |
-3 |
4e-111 |
351 |
179/286 (63%) |
13104.m05258 protein glycosyl hydrolases family 16, putative, expressed |
TAIR PP10 |
AT5G57540.1 |
-3 |
1e-88 |
288 |
138/280 (49%) |
| Symbols: XTH13, AtXTH13 | xyloglucan endotransglucosylase/hydrolase 13 | chr5:23302996-23304049 REVERSE LENGTH=284 |