- Predicted Gene MLOC_71748
MLOC_71748 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71748_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71748_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.4303 | 2.00092 | 2.17226 | 1.38054 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.467388 | 3.08179 | 14.8765 | 4.33475 |
INF1 | Young developing inflorescences (5mm) | 0.00000253651 | 0 | 0.0131939 | 0.0065221 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.012945 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.40252 | 7.47123 | 5.59979 | 6.91764 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0449172 | 0.103002 | 0.0867454 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0246542 | 0 | 0.0137089 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0800224 | 0.0793979 | 0.0245909 | 0.209174 |
CDS Structure of MLOC_71748
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71748.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g13980.1 |
+1 |
7e-107 |
344 |
159/266 (60%) |
13108.m01499 protein glycosyl hydrolases family 16, putative, expressed |
TAIR PP10 |
AT3G23730.1 |
+1 |
4e-74 |
251 |
129/251 (51%) |
| Symbols: XTH16 | xyloglucan endotransglucosylase/hydrolase 16 | chr3:8550222-8551248 FORWARD LENGTH=291 |