MLOC_71722 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.505491.893881.66981.81059
LEAShoots from the seedlings (10 cm shoot stage)1.213143.383683.879092.40601
INF1Young developing inflorescences (5mm)0.1373830.1054720.09546430.104212
INF2Developing inflorescences (1-1.5 cm)0.9526451.352041.231661.40318
ROORoots from the seedlings (10 cm shoot stage)3.009022.385922.346342.85356
NODDeveloping tillers at six leaf stage, 3rd internode0.2581250.4420860.6206081.42692
CAR5Developing grain, bracts removed (5 DPA)3.645973.700163.350863.73713
CAR15Developing grain, bracts removed (15 DPA)0.7496210.7861410.6976271.9638



CDS Structure of MLOC_71722






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71722.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368225NoneNoneNoneNone
MLOC_71722.1CUST_457_PI427708083AvailableAvailablecontig_60376 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41490.1 +3 2e-155 474 243/327 (74%) 13112.m04330 protein cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed
TAIR PP10 AT5G10530.1 +3 6e-107 345 174/310 (56%) Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651