- Predicted Gene MLOC_71715
MLOC_71715 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71715_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71715_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.3329 | 9.43884 | 10.5555 | 12.2264 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.7922 | 7.21159 | 8.34386 | 8.39457 |
INF1 | Young developing inflorescences (5mm) | 27.5603 | 29.6711 | 25.9114 | 27.2774 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.7883 | 32.5099 | 30.1644 | 40.248 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.57669 | 13.6053 | 12.2204 | 19.2278 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.49201 | 8.71965 | 14.255 | 34.4679 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.9102 | 23.6998 | 21.7935 | 27.8346 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.9602 | 10.4718 | 10.7598 | 30.5582 |
CDS Structure of MLOC_71715
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71715.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g37140.1 |
+3 |
0.0 |
566 |
328/427 (77%) |
13107.m03819 protein expressed protein |
TAIR PP10 |
AT1G62310.1 |
+3 |
5e-28 |
121 |
80/248 (32%) |
transcription factor jumonji (jmjC) domain-containing protein | chr1:23036039-23039301 REVERSE LENGTH=883 |