MLOC_71693 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.219629.235225.218627.3924
LEAShoots from the seedlings (10 cm shoot stage)13.774612.232218.063113.3048
INF1Young developing inflorescences (5mm)0.1875770.1098320.03106670.105059
INF2Developing inflorescences (1-1.5 cm)0.1608960.1054920.1260740.15216
ROORoots from the seedlings (10 cm shoot stage)124.79982.188358.2522107.034
NODDeveloping tillers at six leaf stage, 3rd internode0.0311870.006541850.03218280.0399626
CAR5Developing grain, bracts removed (5 DPA)277.054239.091249.605262.445
CAR15Developing grain, bracts removed (15 DPA)4.575064.557383.4466810.649



CDS Structure of MLOC_71693






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71693.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251377.1NoneNoneNoneNone
MLOC_71693.1CUST_6073_PI427708080AvailableAvailablecontig_60322 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32920.5 -1 0.0 1221 616/777 (79%) 13104.m03166 protein potassium transporter, putative, expressed
TAIR PP10 AT4G13420.1 -1 0.0 862 433/769 (56%) | Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785