- Predicted Gene MLOC_71683
MLOC_71683 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71683_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71683_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.74855 | 6.31269 | 7.02079 | 6.24596 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.8587 | 19.0732 | 16.5944 | 13.5249 |
INF1 | Young developing inflorescences (5mm) | 9.84907 | 10.3793 | 11.9889 | 8.35463 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.38915 | 13.9791 | 9.20788 | 11.875 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.4895 | 8.75866 | 7.78193 | 9.83982 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.22239 | 9.46947 | 11.5143 | 33.6684 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.46569 | 8.94384 | 10.1901 | 8.70861 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.44036 | 2.9867 | 2.5038 | 6.63326 |
CDS Structure of MLOC_71683
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71683.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g21330.1 |
-3 |
0.0 |
628 |
357/482 (74%) |
13106.m02280 protein ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed |
TAIR PP10 |
AT2G04740.1 |
-3 |
9e-170 |
497 |
288/484 (60%) |
ankyrin repeat family protein | chr2:1657137-1659563 FORWARD LENGTH=578 |