MLOC_71683 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.748556.312697.020796.24596
LEAShoots from the seedlings (10 cm shoot stage)13.858719.073216.594413.5249
INF1Young developing inflorescences (5mm)9.8490710.379311.98898.35463
INF2Developing inflorescences (1-1.5 cm)9.3891513.97919.2078811.875
ROORoots from the seedlings (10 cm shoot stage)7.48958.758667.781939.83982
NODDeveloping tillers at six leaf stage, 3rd internode7.222399.4694711.514333.6684
CAR5Developing grain, bracts removed (5 DPA)9.465698.9438410.19018.70861
CAR15Developing grain, bracts removed (15 DPA)3.440362.98672.50386.63326



CDS Structure of MLOC_71683






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71683.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370397NoneNoneNoneNone
MLOC_71683.2CUST_6072_PI427708080AvailableAvailablecontig_60296 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g21330.1 -3 0.0 628 357/482 (74%) 13106.m02280 protein ABB1 - Ankyrin repeat region with 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains, expressed
TAIR PP10 AT2G04740.1 -3 9e-170 497 288/484 (60%) ankyrin repeat family protein | chr2:1657137-1659563 FORWARD LENGTH=578