MLOC_71682 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6024984.456174.056783.01566
LEAShoots from the seedlings (10 cm shoot stage)1.715542.925861.159571.49441
INF1Young developing inflorescences (5mm)2.6292.762662.226181.98633
INF2Developing inflorescences (1-1.5 cm)2.903353.849763.030333.412
ROORoots from the seedlings (10 cm shoot stage)0.8728373.147581.519732.85792
NODDeveloping tillers at six leaf stage, 3rd internode0.7511541.311950.5569213.42447
CAR5Developing grain, bracts removed (5 DPA)3.233522.71023.041362.70605
CAR15Developing grain, bracts removed (15 DPA)0.9854180.7644691.138282.03184



CDS Structure of MLOC_71682






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71682.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71682.1CUST_15694_PI427708080AvailableAvailablecontig_6029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g34890.1 +3 0.0 855 434/581 (75%) 13101.m03524 protein GLUCAN SYNTHASE-LIKE protein, putative
TAIR PP10 AT3G59100.1 +3 0.0 766 400/730 (55%) | Symbols: ATGSL11, gsl11 | glucan synthase-like 11 | chr3:21843407-21853860 FORWARD LENGTH=1921