MLOC_71615 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.380717.801220.17619.2714
LEAShoots from the seedlings (10 cm shoot stage)0.8421840.1646990.03878990.28669
INF1Young developing inflorescences (5mm)0.350390.2431760.1328150.218477
INF2Developing inflorescences (1-1.5 cm)0.05357620.17070.1946470.162746
ROORoots from the seedlings (10 cm shoot stage)6.273336.709044.338937.28785
NODDeveloping tillers at six leaf stage, 3rd internode0.0308214000.00210096
CAR5Developing grain, bracts removed (5 DPA)0.08632880.04095470.02119340.0507973
CAR15Developing grain, bracts removed (15 DPA)0.133540.0385590.2394140.317609



CDS Structure of MLOC_71615






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71615.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376468NoneNoneNoneNone
MLOC_71615.2CUST_6066_PI427708080AvailableAvailablecontig_60182 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70970.1 -1 0.0 563 303/385 (79%) 13101.m07727 protein protein kinase, putative, expressed
TAIR PP10 AT3G26700.1 -1 3e-105 329 181/348 (52%) Protein kinase superfamily protein | chr3:9810669-9812356 FORWARD LENGTH=380