- Predicted Gene MLOC_71601
MLOC_71601 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71601_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71601_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 11.7825 | 8.65666 | 8.25822 | 9.94614 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.737 | 3.70439 | 4.87644 | 4.71599 |
INF1 | Young developing inflorescences (5mm) | 18.0812 | 15.5601 | 13.8509 | 14.0797 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.6605 | 13.5785 | 13.8433 | 15.3385 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.40803 | 9.74524 | 10.722 | 11.9075 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.124728 | 0.228147 | 1.09181 | 1.18993 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.3973 | 14.8446 | 15.6459 | 15.5766 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.7351 | 4.29456 | 2.61548 | 9.91926 |
CDS Structure of MLOC_71601
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71601.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g12320.1 |
-3 |
0.0 |
731 |
395/520 (76%) |
13107.m01270 protein WD domain, G-beta repeat domain containing protein, expressed |
TAIR PP10 |
AT2G47990.1 |
-3 |
8e-127 |
398 |
231/506 (46%) |
| Symbols: SWA1, EDA13, EDA19 | transducin family protein / WD-40 repeat family protein | chr2:19637010-19638602 REVERSE LENGTH=530 |