- Predicted Gene MLOC_71588
MLOC_71588 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.38122 | 7.87354 | 9.8184 | 8.22718 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.74853 | 8.18871 | 6.41261 | 6.07498 |
| INF1 | Young developing inflorescences (5mm) | 8.05088 | 8.08363 | 7.64338 | 6.85449 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.1571 | 9.00873 | 8.18027 | 10.0905 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.02928 | 3.87786 | 3.27036 | 4.89865 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.6627 | 10.9709 | 3.33938 | 30.5123 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.5299 | 11.0579 | 11.1699 | 10.829 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.18444 | 5.06352 | 4.77714 | 11.1019 |
CDS Structure of MLOC_71588
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71588.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g06060.1 |
-1 |
0.0 |
707 |
343/365 (94%) |
13108.m00602 protein CGMC_MAPKCMGC_2_ERK.13 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| TAIR PP10 |
AT4G01370.1 |
-1 |
0.0 |
630 |
297/362 (82%) |
| Symbols: ATMPK4, MPK4 | MAP kinase 4 | chr4:567219-568889 FORWARD LENGTH=376 |
