MLOC_71571 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.648711.828911.640110.766
LEAShoots from the seedlings (10 cm shoot stage)10.03425.721256.458585.84339
INF1Young developing inflorescences (5mm)16.138914.688812.850711.6007
INF2Developing inflorescences (1-1.5 cm)8.799810.8929.991399.94006
ROORoots from the seedlings (10 cm shoot stage)7.061310.55447.4224410.0595
NODDeveloping tillers at six leaf stage, 3rd internode5.289487.530096.0668421.7348
CAR5Developing grain, bracts removed (5 DPA)23.081522.116819.827919.1519
CAR15Developing grain, bracts removed (15 DPA)9.3011910.32417.0221820.113



CDS Structure of MLOC_71571






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71571.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365201NoneNoneNoneNone
MLOC_71571.1CUST_6058_PI427708080AvailableAvailablecontig_60089 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g48140.1 +2 0.0 968 510/586 (87%) 13104.m04895 protein methyltransferase, putative, expressed
TAIR PP10 AT4G00740.1 +2 0.0 749 357/508 (70%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:307815-310298 REVERSE LENGTH=600