- Predicted Gene MLOC_71570
MLOC_71570 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.02553 | 9.78022 | 9.60346 | 10.9413 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 234.67 | 458.71 | 452.647 | 371.701 |
INF1 | Young developing inflorescences (5mm) | 10.7338 | 12.7519 | 9.77236 | 11.1603 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.68388 | 2.54668 | 2.32386 | 3.25612 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.418929 | 1.47518 | 2.85846 | 2.24385 |
NOD | Developing tillers at six leaf stage, 3rd internode | 92.9401 | 91.2346 | 102.431 | 325.201 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.6594 | 63.1408 | 56.3609 | 69.272 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.0854 | 15.3336 | 11.9639 | 36.491 |
CDS Structure of MLOC_71570
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71570.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g01340.2 |
+3 |
0.0 |
575 |
285/336 (85%) |
13102.m00051 protein ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT5G66190.1 |
+3 |
0.0 |
550 |
265/316 (84%) |
| Symbols: ATLFNR1, FNR1 | ferredoxin-NADP(+)-oxidoreductase 1 | chr5:26451203-26453012 REVERSE LENGTH=360 |