MLOC_71570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.025539.780229.6034610.9413
LEAShoots from the seedlings (10 cm shoot stage)234.67458.71452.647371.701
INF1Young developing inflorescences (5mm)10.733812.75199.7723611.1603
INF2Developing inflorescences (1-1.5 cm)2.683882.546682.323863.25612
ROORoots from the seedlings (10 cm shoot stage)0.4189291.475182.858462.24385
NODDeveloping tillers at six leaf stage, 3rd internode92.940191.2346102.431325.201
CAR5Developing grain, bracts removed (5 DPA)50.659463.140856.360969.272
CAR15Developing grain, bracts removed (15 DPA)11.085415.333611.963936.491



CDS Structure of MLOC_71570






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252048.1NoneNoneNoneNone
AK253057.1NoneNoneNoneNone
MLOC_71570.1CUST_6057_PI427708080AvailableAvailablecontig_60084 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01340.2 +3 0.0 575 285/336 (85%) 13102.m00051 protein ferredoxin--NADP reductase, chloroplast precursor, putative, expressed
TAIR PP10 AT5G66190.1 +3 0.0 550 265/316 (84%) | Symbols: ATLFNR1, FNR1 | ferredoxin-NADP(+)-oxidoreductase 1 | chr5:26451203-26453012 REVERSE LENGTH=360