MLOC_71554 FPKM values

FPKM by Treatment	FPKM by Replicate

Treatment ID	Treatment Description	Rep 1 FPKM	Rep 2 FPKM	Rep 3 FPKM	Treatment FPKM
EMB	4-day embryos dissected from germinating grains	17.2594	11.3105	12.3612	10.2389
LEA	Shoots from the seedlings (10 cm shoot stage)	12.3715	8.68004	7.78069	6.39576
INF1	Young developing inflorescences (5mm)	28.9247	25.2222	22.0374	15.8735
INF2	Developing inflorescences (1-1.5 cm)	17.7534	23.2106	21.4112	16.6642
ROO	Roots from the seedlings (10 cm shoot stage)	11.5229	15.8922	13.474	12.1892
NOD	Developing tillers at six leaf stage, 3rd internode	5.02983	4.70332	9.20513	12.5576
CAR5	Developing grain, bracts removed (5 DPA)	14.9296	16.2449	16.7373	10.9458
CAR15	Developing grain, bracts removed (15 DPA)	6.68031	5.19693	4.50838	9.7536

CDS Structure of MLOC_71554

Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71554.1

Cluster member	Probe ID	FPKM by replicate	FPKM by treatment	Source Contig
MLOC_71554.1	CUST_13117_PI427708083	Available	Available	contig_60054 (Mapped)

Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP6	LOC_Os04g56350.1	+2	1e-43	165	113/173 (65%)	13104.m05864 protein nucleolar protein,Nop52 containing protein, expressed
TAIR PP10	AT5G20600.1	+2	4e-19	91	51/130 (39%)	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). | chr5:6966345-6967943 REVERSE LENGTH=532