- Predicted Gene MLOC_71540
MLOC_71540 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71540_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71540_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 19.3166 | 17.2292 | 17.8676 | 16.9679 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.113 | 13.7156 | 15.3503 | 11.2975 |
INF1 | Young developing inflorescences (5mm) | 26.2314 | 28.5623 | 28.1552 | 21.8698 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.7623 | 26.4003 | 24.5777 | 25.0342 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.1534 | 20.6719 | 15.8226 | 22.1143 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.75769 | 7.29043 | 8.94045 | 23.8033 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.3165 | 24.7027 | 26.5152 | 22.6019 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.95001 | 6.71509 | 6.83676 | 13.7599 |
CDS Structure of MLOC_71540
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71540.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g40540.1 |
+3 |
0.0 |
653 |
334/383 (87%) |
13110.m03755 protein enoyl-CoA hydratase/isomerase family protein, putative, expressed |
TAIR PP10 |
AT4G31810.1 |
+3 |
3e-166 |
484 |
236/382 (62%) |
ATP-dependent caseinolytic (Clp) protease/crotonase family protein | chr4:15387365-15390290 REVERSE LENGTH=409 |