MLOC_71539 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.90165.513324.890070
LEAShoots from the seedlings (10 cm shoot stage)4.839642.511422.964240
INF1Young developing inflorescences (5mm)3.849572.753414.208370
INF2Developing inflorescences (1-1.5 cm)2.303883.715726.743450
ROORoots from the seedlings (10 cm shoot stage)14.27989.965538.639350
NODDeveloping tillers at six leaf stage, 3rd internode14.457610.963818.24770
CAR5Developing grain, bracts removed (5 DPA)1.903721.951412.572960
CAR15Developing grain, bracts removed (15 DPA)0.2883380.60031100



CDS Structure of MLOC_71539






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250397.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250397.1CUST_18839_PI427708080NoneNoneNone
MLOC_38983.1NoneAvailableNonecontig_2551939 (Mapped)
MLOC_42483.1NoneAvailableNonecontig_2646846 (Not mapped)
MLOC_43288.1NoneAvailableNonecontig_26914 (Mapped)
MLOC_46282.1NoneAvailableNonecontig_288020 (Not mapped)
MLOC_50401.1NoneAvailableNonecontig_35949 (Mapped)
MLOC_52798.1NoneAvailableAvailablecontig_378 (Not mapped)
MLOC_58585.1NoneAvailableNonecontig_42801 (Mapped)
MLOC_71539.1NoneAvailableNonecontig_60029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----