- Predicted Gene MLOC_71436
MLOC_71436 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71436_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71436_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 181.757 | 143.344 | 169.025 | 140.984 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1099.88 | 614.775 | 482.121 | 575.742 |
INF1 | Young developing inflorescences (5mm) | 3.22957 | 1.75988 | 1.8864 | 1.85849 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.21826 | 4.35871 | 6.16786 | 4.42363 |
ROO | Roots from the seedlings (10 cm shoot stage) | 23.9872 | 110.974 | 31.696 | 84.6818 |
NOD | Developing tillers at six leaf stage, 3rd internode | 66.0416 | 98.0323 | 16.5736 | 222.235 |
CAR5 | Developing grain, bracts removed (5 DPA) | 607.698 | 761.295 | 629.813 | 564.896 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.3817 | 7.31346 | 31.533 | 36.1832 |
CDS Structure of MLOC_71436
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71436.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g24070.1 |
-2 |
5e-28 |
108 |
57/92 (62%) |
13111.m02293 protein LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT5G59310.1 |
-2 |
2e-22 |
92 |
47/89 (53%) |
| Symbols: LTP4 | lipid transfer protein 4 | chr5:23925296-23925772 REVERSE LENGTH=112 |