MLOC_71416 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains598.51451.871455.038472.282
LEAShoots from the seedlings (10 cm shoot stage)46.5277202.246233.535122.27
INF1Young developing inflorescences (5mm)53.459570.577265.810154.1219
INF2Developing inflorescences (1-1.5 cm)24.88234.363047.5663213.3961
ROORoots from the seedlings (10 cm shoot stage)323.722639.93359.822615.034
NODDeveloping tillers at six leaf stage, 3rd internode1333.67181.458.38513395.192
CAR5Developing grain, bracts removed (5 DPA)355.974444.331380.801388.766
CAR15Developing grain, bracts removed (15 DPA)25.800931.542824.301565.2166



CDS Structure of MLOC_71416






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71416.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375535NoneNoneNoneNone
MLOC_71416.1CUST_6040_PI427708080AvailableAvailablecontig_59782 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04050.1 +1 3e-11 61 30/59 (51%) 13101.m00359 protein BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
TAIR PP10None-----