- Predicted Gene MLOC_71414
MLOC_71414 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.0765 | 19.6781 | 19.6929 | 17.602 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.5397 | 12.4361 | 9.73495 | 10.0593 |
| INF1 | Young developing inflorescences (5mm) | 43.6508 | 36.9892 | 43.2768 | 34.9427 |
| INF2 | Developing inflorescences (1-1.5 cm) | 55.6925 | 33.6428 | 31.4236 | 44.723 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.49699 | 11.7512 | 15.8778 | 12.6401 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.98297 | 2.66671 | 7.68188 | 9.59804 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.8191 | 12.9845 | 12.8114 | 12.5897 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.41386 | 6.222 | 8.46701 | 16.1508 |
CDS Structure of MLOC_71414
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71414.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g13990.3 |
-2 |
3e-17 |
78 |
35/41 (85%) |
13102.m01559 protein U2 small nuclear ribonucleoprotein A, putative, expressed |
| TAIR PP10 |
AT1G09760.1 |
-2 |
3e-17 |
79 |
36/41 (88%) |
| Symbols: U2A | U2 small nuclear ribonucleoprotein A | chr1:3159476-3161603 REVERSE LENGTH=249 |