MLOC_71397 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.491726.200425.275376.15365
LEAShoots from the seedlings (10 cm shoot stage)55.81107.469120.00674.5352
INF1Young developing inflorescences (5mm)8.435967.615555.679376.81
INF2Developing inflorescences (1-1.5 cm)5.686846.373055.980167.60979
ROORoots from the seedlings (10 cm shoot stage)0.5802771.023851.756541.26489
NODDeveloping tillers at six leaf stage, 3rd internode31.94432.749840.432282.0747
CAR5Developing grain, bracts removed (5 DPA)16.463819.533316.070519.8327
CAR15Developing grain, bracts removed (15 DPA)0.7137761.347870.981232.97154



CDS Structure of MLOC_71397






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71397.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360451NoneNoneNoneNone
MLOC_71397.1CUST_6037_PI427708080AvailableAvailablecontig_59753 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g38640.1 -2 1e-32 122 91/108 (84%) 13112.m03986 protein expressed protein
TAIR PP10 AT5G08050.1 -2 7e-22 91 65/105 (62%) Protein of unknown function (DUF1118) | chr5:2578418-2578964 FORWARD LENGTH=158