MLOC_71396 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.017733900.0228620.0113837
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.0036987500.00873304
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_71396






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71396.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376793NoneNoneNoneNone
MLOC_71396.1CUST_7026_PI427708080AvailableAvailablecontig_59751 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08610.1 +2 0.0 813 395/501 (79%) 13103.m00995 protein leucine-rich repeat family protein, putative, expressed
TAIR PP10 AT3G19230.1 +2 0.0 541 258/484 (53%) Leucine-rich repeat (LRR) family protein | chr3:6661088-6663519 REVERSE LENGTH=519