MLOC_71395 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.491016.981646.514658.42466
LEAShoots from the seedlings (10 cm shoot stage)2.13390.5020130.8099071.01791
INF1Young developing inflorescences (5mm)47.127553.632854.631651.6482
INF2Developing inflorescences (1-1.5 cm)26.314443.557733.474746.2608
ROORoots from the seedlings (10 cm shoot stage)2.6855.920617.818058.55168
NODDeveloping tillers at six leaf stage, 3rd internode0.1806560.06897290.04193060.222173
CAR5Developing grain, bracts removed (5 DPA)4.307724.89874.950545.64917
CAR15Developing grain, bracts removed (15 DPA)0.6870260.2039360.492721.20301



CDS Structure of MLOC_71395






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71395.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249804.1NoneNoneNoneNone
MLOC_71395.2CUST_6036_PI427708080AvailableAvailablecontig_59751 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08620.1 +3 4e-107 324 174/229 (76%) 13103.m00997 protein B3 DNA binding domain containing protein, expressed
TAIR PP10 AT3G19184.1 +3 2e-44 160 106/228 (46%) AP2/B3-like transcriptional factor family protein | chr3:6637555-6639035 FORWARD LENGTH=277