MLOC_71382 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.710811.236413.512414.0176
LEAShoots from the seedlings (10 cm shoot stage)17.26876.366138.265118.94499
INF1Young developing inflorescences (5mm)0.5535050.7990160.4497680.595241
INF2Developing inflorescences (1-1.5 cm)0.129690.1456930.1574480.184102
ROORoots from the seedlings (10 cm shoot stage)22.558920.392722.353326.4816
NODDeveloping tillers at six leaf stage, 3rd internode162.113120.38345.058293.792
CAR5Developing grain, bracts removed (5 DPA)7.349269.174689.243649.99614
CAR15Developing grain, bracts removed (15 DPA)1.357542.2451.526024.81197



CDS Structure of MLOC_71382






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71382.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250489.1NoneNoneNoneNone
MLOC_71382.1CUST_6035_PI427708080AvailableAvailablecontig_59731 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g53850.1 -1 3e-153 446 233/339 (69%) 13104.m05558 protein leucoanthocyanidin reductase, putative, expressed
TAIR PP10 AT1G61720.1 -1 9e-89 280 157/329 (48%) | Symbols: BAN | NAD(P)-binding Rossmann-fold superfamily protein | chr1:22791326-22792757 REVERSE LENGTH=340