MLOC_7137 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1536090.1154770.1275690.142263
LEAShoots from the seedlings (10 cm shoot stage)0.2632950.3827970.7065920.415099
INF1Young developing inflorescences (5mm)0.3421720.3916980.9719550.530033
INF2Developing inflorescences (1-1.5 cm)0.0395860.09282840.2188090.129137
ROORoots from the seedlings (10 cm shoot stage)0.4797010.7931790.3281030.912251
NODDeveloping tillers at six leaf stage, 3rd internode0.469190.6375610.1076551.6883
CAR5Developing grain, bracts removed (5 DPA)1.804361.381621.404211.62132
CAR15Developing grain, bracts removed (15 DPA)0.1270110.08269260.1579050.312678



CDS Structure of MLOC_7137






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7137.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356567NoneNoneNoneNone
MLOC_7137.1CUST_65_PI427708083AvailableAvailablecontig_138694 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38800.1 +3 0.0 552 326/502 (65%) 13103.m04212 protein AAA family ATPase, putative, expressed
TAIR PP10 AT2G18193.1 +3 1e-111 347 195/448 (44%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:7917621-7919184 REVERSE LENGTH=495