MLOC_71333 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.02517.583797.390727.75045
LEAShoots from the seedlings (10 cm shoot stage)3.380689.8827111.0445.80702
INF1Young developing inflorescences (5mm)0.05414180.1085210.04510430.0623254
INF2Developing inflorescences (1-1.5 cm)0.173260.2283360.2282140.231783
ROORoots from the seedlings (10 cm shoot stage)29.852817.434126.368119.2012
NODDeveloping tillers at six leaf stage, 3rd internode0.06151980.1375890.297310.407203
CAR5Developing grain, bracts removed (5 DPA)1.847892.494982.131842.07411
CAR15Developing grain, bracts removed (15 DPA)1.014341.104260.8477062.50891



CDS Structure of MLOC_71333






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71333.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369933NoneNoneNoneNone
MLOC_71333.2CUST_6027_PI427708080AvailableAvailablecontig_59635 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65110.1 -3 0.0 793 436/503 (87%) 13101.m07033 protein POT family protein, expressed
TAIR PP10 AT1G22540.1 -3 0.0 534 281/533 (53%) Major facilitator superfamily protein | chr1:7964202-7966222 FORWARD LENGTH=557