- Predicted Gene MLOC_71276
MLOC_71276 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71276_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71276_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.20536 | 5.57302 | 5.59406 | 7.0115 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.84234 | 0.928002 | 1.0453 | 1.72017 |
INF1 | Young developing inflorescences (5mm) | 17.7837 | 24.3327 | 24.5167 | 21.7601 |
INF2 | Developing inflorescences (1-1.5 cm) | 24.4203 | 25.6415 | 24.8933 | 32.7911 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.06958 | 6.41081 | 5.32394 | 9.14749 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.47762 | 6.631 | 3.98785 | 22.4887 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.70315 | 8.13873 | 7.35824 | 9.34176 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.13193 | 1.17104 | 1.04622 | 3.12741 |
CDS Structure of MLOC_71276
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71276.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g29970.1 |
+1 |
2e-116 |
347 |
205/265 (77%) |
13109.m02982 protein TMV-MP30 binding protein 2C, putative, expressed |
TAIR PP10 |
AT5G08120.1 |
+1 |
1e-25 |
107 |
66/189 (35%) |
| Symbols: MPB2C | movement protein binding protein 2C | chr5:2600743-2602678 REVERSE LENGTH=326 |