MLOC_71267 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6142720.257290.4337330.367366
LEAShoots from the seedlings (10 cm shoot stage)0.8831880.3179270.8367610.503296
INF1Young developing inflorescences (5mm)0.030646900.03787690.0573353
INF2Developing inflorescences (1-1.5 cm)0.4255840.2929190.1877660.358297
ROORoots from the seedlings (10 cm shoot stage)50.421927.943429.947429.7526
NODDeveloping tillers at six leaf stage, 3rd internode0.02584580.05651720.05661410.136155
CAR5Developing grain, bracts removed (5 DPA)0.2501570.2426610.1545920.218646
CAR15Developing grain, bracts removed (15 DPA)0.2125690.3885770.1141150.678718



CDS Structure of MLOC_71267






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71267.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_71267.1CUST_15641_PI427708080AvailableAvailablecontig_5946 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g13130.1 +3 2e-90 278 169/250 (68%) 13101.m01443 protein aquaporin protein, putative, expressed
TAIR PP10 AT2G25810.1 +3 4e-68 219 107/175 (61%) | Symbols: TIP4;1 | tonoplast intrinsic protein 4;1 | chr2:11012658-11013906 FORWARD LENGTH=249