- Predicted Gene MLOC_71244
MLOC_71244 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71244_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71244_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.43961 | 6.43501 | 6.74565 | 7.9536 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.0569 | 0.474907 | 1.34122 | 1.36369 |
INF1 | Young developing inflorescences (5mm) | 2.44589 | 1.92501 | 1.28042 | 1.85289 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.98049 | 3.31719 | 3.37229 | 3.846 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.51384 | 3.7649 | 3.995 | 5.10684 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.515508 | 0.450876 | 0.0174732 | 0.978445 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.695376 | 0.703864 | 0.607013 | 0.789424 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.747157 | 0.584543 | 0.561704 | 1.77653 |
CDS Structure of MLOC_71244
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71244.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g07764.2 |
-3 |
0.0 |
645 |
331/460 (72%) |
13105.m00852 protein carboxyl-terminal proteinase, putative, expressed |
TAIR PP10 |
AT1G23340.2 |
-3 |
0.0 |
527 |
265/425 (62%) |
Protein of Unknown Function (DUF239) | chr1:8284158-8286528 REVERSE LENGTH=409 |