MLOC_71242 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.734426.972524.286527.6144
LEAShoots from the seedlings (10 cm shoot stage)1.449348.6758334.321115.1045
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.083285400.457910.277279
ROORoots from the seedlings (10 cm shoot stage)12.216514.41648.0429916.9171
NODDeveloping tillers at six leaf stage, 3rd internode0.6888730.5633710.1143171.50737
CAR5Developing grain, bracts removed (5 DPA)0.05173850.09706880.09926370.0970839
CAR15Developing grain, bracts removed (15 DPA)3.630974.933552.1228310.433



CDS Structure of MLOC_71242






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71242.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249493.1NoneNoneNoneNone
MLOC_71242.1CUST_6015_PI427708080AvailableAvailablecontig_59405 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34920.1 +2 2e-90 271 130/178 (73%) 13110.m03119 protein secretory protein, putative, expressed
TAIR PP10 AT2G15220.1 +2 2e-85 259 116/196 (59%) Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225