MLOC_71240 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.501967.660697.785897.6532
LEAShoots from the seedlings (10 cm shoot stage)9.246728.7178710.31978.20303
INF1Young developing inflorescences (5mm)10.758511.052211.59149.58065
INF2Developing inflorescences (1-1.5 cm)11.961611.666711.71112.9949
ROORoots from the seedlings (10 cm shoot stage)9.6487811.28419.0067513.434
NODDeveloping tillers at six leaf stage, 3rd internode8.0897711.165811.014637.0144
CAR5Developing grain, bracts removed (5 DPA)12.642312.979812.234212.4685
CAR15Developing grain, bracts removed (15 DPA)4.672564.177854.3174610.4401



CDS Structure of MLOC_71240






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71240.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368070NoneNoneNoneNone
MLOC_71240.1CUST_6013_PI427708080AvailableAvailablecontig_59400 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g63590.1 +1 0.0 1201 625/695 (90%) 13103.m07052 protein metallo-beta-lactamase, putative, expressed
TAIR PP10 AT1G61010.3 +1 0.0 1035 533/695 (77%) | Symbols: CPSF73-I | cleavage and polyadenylation specificity factor 73-I | chr1:22474954-22477660 REVERSE LENGTH=693