MLOC_71233 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.988759.3988810.71499.73655
LEAShoots from the seedlings (10 cm shoot stage)5.534642.421163.609943.22425
INF1Young developing inflorescences (5mm)0.08889530.049885700.0650153
INF2Developing inflorescences (1-1.5 cm)0.5256110.8606590.6439470.735702
ROORoots from the seedlings (10 cm shoot stage)0.5393581.691782.167841.74376
NODDeveloping tillers at six leaf stage, 3rd internode6.204075.703872.8942315.3326
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.02253910.05030810.06579810.119752



CDS Structure of MLOC_71233






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71233.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248790.1NoneNoneNoneNone
MLOC_71233.2CUST_6011_PI427708080AvailableAvailablecontig_59386 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g11354.1 -1 0.0 654 361/481 (75%) 13110.m01034 protein MATE efflux family protein, putative, expressed
TAIR PP10 AT5G52450.1 -1 3e-162 479 277/453 (61%) MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486