- Predicted Gene MLOC_71233
MLOC_71233 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71233_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71233_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.98875 | 9.39888 | 10.7149 | 9.73655 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.53464 | 2.42116 | 3.60994 | 3.22425 |
INF1 | Young developing inflorescences (5mm) | 0.0888953 | 0.0498857 | 0 | 0.0650153 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.525611 | 0.860659 | 0.643947 | 0.735702 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.539358 | 1.69178 | 2.16784 | 1.74376 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.20407 | 5.70387 | 2.89423 | 15.3326 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0225391 | 0.0503081 | 0.0657981 | 0.119752 |
CDS Structure of MLOC_71233
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71233.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g11354.1 |
-1 |
0.0 |
654 |
361/481 (75%) |
13110.m01034 protein MATE efflux family protein, putative, expressed |
TAIR PP10 |
AT5G52450.1 |
-1 |
3e-162 |
479 |
277/453 (61%) |
MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486 |