- Predicted Gene MLOC_71188
MLOC_71188 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 83.8208 | 67.5758 | 62.3174 | 64.6562 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 49.021 | 43.3987 | 49.6983 | 34.5929 |
| INF1 | Young developing inflorescences (5mm) | 50.8282 | 48.2662 | 46.5461 | 40.3807 |
| INF2 | Developing inflorescences (1-1.5 cm) | 41.1627 | 41.439 | 46.6424 | 47.1683 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 112.788 | 90.1381 | 91.8366 | 93.339 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 58.5818 | 37.2807 | 45.8569 | 84.5905 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 83.3051 | 93.1466 | 72.9572 | 81.6103 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 106.439 | 115.959 | 102.352 | 263.448 |
CDS Structure of MLOC_71188
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71188.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g08180.1 |
+2 |
3e-30 |
110 |
69/69 (100%) |
13102.m00943 protein protein transport protein SEC61 subunit gamma, putative, expressed |
| TAIR PP10 |
AT5G50460.1 |
+2 |
5e-28 |
103 |
63/68 (93%) |
secE/sec61-gamma protein transport protein | chr5:20552168-20552509 REVERSE LENGTH=69 |