MLOC_71159 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.973329.27627.64128.39946
LEAShoots from the seedlings (10 cm shoot stage)3.673350.3325640.7667591.32
INF1Young developing inflorescences (5mm)7.576176.505355.542695.74814
INF2Developing inflorescences (1-1.5 cm)3.269934.631043.011864.23612
ROORoots from the seedlings (10 cm shoot stage)3.02394.48013.684384.66214
NODDeveloping tillers at six leaf stage, 3rd internode0.02055040.04922040.02356420.119883
CAR5Developing grain, bracts removed (5 DPA)0.5998290.6901510.7419850.676787
CAR15Developing grain, bracts removed (15 DPA)0.2314340.1197930.1166780.400001



CDS Structure of MLOC_71159






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71159.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360756NoneNoneNoneNone
MLOC_71159.1CUST_6002_PI427708080AvailableAvailablecontig_59255 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18630.1 +1 0.0 1080 642/766 (84%) 13103.m02232 protein receptor-like kinase RHG1, putative, expressed
TAIR PP10 AT3G51740.1 +1 0.0 717 428/789 (54%) | Symbols: IMK2 | inflorescence meristem receptor-like kinase 2 | chr3:19189248-19191842 FORWARD LENGTH=836