- Predicted Gene MLOC_71157
MLOC_71157 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_71157_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_71157_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.3024 | 10.4851 | 10.3724 | 10.2751 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.4131 | 15.5769 | 15.4584 | 12.631 |
INF1 | Young developing inflorescences (5mm) | 12.2698 | 11.5298 | 12.1243 | 10.5501 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.6717 | 11.3007 | 12.8951 | 13.4946 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.6907 | 10.2043 | 10.1586 | 13.8263 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.0987 | 11.3856 | 17.6889 | 44.7568 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.2364 | 10.8989 | 10.4485 | 11.1094 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.20836 | 5.45728 | 4.81596 | 12.5621 |
CDS Structure of MLOC_71157
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71157.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g45730.1 |
+3 |
0.0 |
663 |
422/707 (60%) |
13103.m04916 protein DNA-binding protein-like, putative, expressed |
TAIR PP10 |
AT5G47430.1 |
+3 |
3e-54 |
204 |
160/505 (32%) |
DWNN domain, a CCHC-type zinc finger | chr5:19235819-19240596 REVERSE LENGTH=892 |