MLOC_71136 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.484721.426328.448127.125
LEAShoots from the seedlings (10 cm shoot stage)11.78686.95367.750997.38845
INF1Young developing inflorescences (5mm)0.06884840.1332820.02870780.0797437
INF2Developing inflorescences (1-1.5 cm)0.024383500.05980090.0554288
ROORoots from the seedlings (10 cm shoot stage)132.07455.146641.783570.2955
NODDeveloping tillers at six leaf stage, 3rd internode6.516735.9170215.483622.9167
CAR5Developing grain, bracts removed (5 DPA)0.030398300.02904860.0575764
CAR15Developing grain, bracts removed (15 DPA)2.970043.406913.207578.59509



CDS Structure of MLOC_71136






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71136.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363741NoneNoneNoneNone
MLOC_71136.2CUST_5998_PI427708080AvailableAvailablecontig_59227 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g23560.1 +2 0.0 550 280/353 (79%) 13109.m02227 protein dehydrogenase, putative, expressed
TAIR PP10 AT4G37980.1 +2 2e-150 437 221/344 (64%) | Symbols: ELI3-1, ELI3, ATCAD7, CAD7 | elicitor-activated gene 3-1 | chr4:17852670-17854302 FORWARD LENGTH=357