MLOC_71112 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.00453.884355.687553.1585
LEAShoots from the seedlings (10 cm shoot stage)82.8551110.981122.00696.8059
INF1Young developing inflorescences (5mm)49.668353.860670.868750.0679
INF2Developing inflorescences (1-1.5 cm)90.965167.969792.189792.3767
ROORoots from the seedlings (10 cm shoot stage)51.951471.610659.595389.7236
NODDeveloping tillers at six leaf stage, 3rd internode50.243249.524659.4702183.882
CAR5Developing grain, bracts removed (5 DPA)58.955752.81557.475857.3614
CAR15Developing grain, bracts removed (15 DPA)32.092231.240732.315575.2221



CDS Structure of MLOC_71112






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71112.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363881NoneNoneNoneNone
MLOC_71112.1CUST_5993_PI427708080AvailableAvailablecontig_5918 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g36300.1 +1 0.0 1509 827/881 (94%) 13109.m03576 protein OsLonP4 - Putative Lon protease homologue, expressed
TAIR PP10 AT5G47040.1 +1 0.0 1294 694/880 (79%) | Symbols: LON2 | lon protease 2 | chr5:19093356-19098678 REVERSE LENGTH=888