- Predicted Gene MLOC_71100
MLOC_71100 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.59924 | 6.68351 | 6.82038 | 6.29193 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.5566 | 6.24361 | 7.03504 | 4.90467 |
INF1 | Young developing inflorescences (5mm) | 11.4993 | 12.4541 | 13.4797 | 8.68742 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.0735 | 12.7688 | 13.6772 | 11.101 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.77288 | 8.03236 | 7.77762 | 7.70438 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.39686 | 8.09353 | 16.3053 | 25.0428 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.5902 | 8.05835 | 9.52923 | 7.86863 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.63025 | 6.87283 | 6.7689 | 12.8605 |
CDS Structure of MLOC_71100
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_71100.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g43780.2 |
-1 |
3e-48 |
172 |
81/104 (78%) |
13105.m10402 protein ESP1, putative, expressed |
TAIR PP10 |
AT1G73840.1 |
-1 |
7e-17 |
82 |
51/108 (47%) |
| Symbols: ESP1 | hydroxyproline-rich glycoprotein family protein | chr1:27763937-27766328 REVERSE LENGTH=388 |