MLOC_71099 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.096412.236712.982712.1229
LEAShoots from the seedlings (10 cm shoot stage)13.663920.132815.869213.5946
INF1Young developing inflorescences (5mm)3.722814.711036.505994.25941
INF2Developing inflorescences (1-1.5 cm)3.586972.341742.209462.96469
ROORoots from the seedlings (10 cm shoot stage)12.633215.26710.802216.9734
NODDeveloping tillers at six leaf stage, 3rd internode12.594510.295612.705431.3862
CAR5Developing grain, bracts removed (5 DPA)15.169114.397713.829413.8144
CAR15Developing grain, bracts removed (15 DPA)1.364491.086171.443913.10884



CDS Structure of MLOC_71099






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_71099.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376472NoneNoneNoneNone
MLOC_71099.4CUST_5991_PI427708080AvailableAvailablecontig_59146 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g43790.1 -2 0.0 527 311/349 (89%) 13105.m04615 protein DUF803 domain containing, putative, expressed
TAIR PP10 AT1G34470.1 -2 9e-123 370 203/296 (69%) Protein of unknown function (DUF803) | chr1:12604574-12606758 FORWARD LENGTH=368